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Selected Publications:
(A more complete list of publications can be found on PubMed)
Christiansen MN, Kolarich D, Nevalainen H, Packer NH, Jensen
PH, (2010) Strategies for determining heterogeneity of mucin-like
O-glycosylated domains: a fungal glucanase model system, Anal Chem,
1;82(9):3500-9.
Deshpande N, Jensen PH, Packer NH, Kolarich D (2010)
Fishing glycopeptides from MS spectra using GlycoSpectrumScan, J Proteome Res. 9(2):1063-75
Jensen PH, Kolarich D, Packer NH (2010) Mucin-type
O-glycosylation--putting the pieces together, FEBS J.
277(1):81-94
Kolarich D, Altmann F (2000) N-Glycan analysis by
matrix-assisted laser desorption/ionization mass spectrometry of
electrophoretically separated nonmammalian proteins: application to peanut
allergen Ara h 1 and olive pollen allergen Ole e 1. Anal
Biochem 285: 64-75
Kolarich D, Altmann F, Sunderasan E. (2006) Structural
analysis of the glycoprotein allergen Hev b 4 from natural rubber latex by mass
spectrometry. Biochim
Biophys Acta;1760(4):715-20.
Kolarich D, Léonard R, Hemmer W, Altmann F, (2005) The
N-glycans of wasp venom hyaluronidases and the protein sequence of its
major isoform in Vespula vulgaris. FEBS
J.;272(20):5182-90
Kolarich D*, Loos A*, Léonard R, Mach L, Marzban G, Hemmer W,
Altmann F, (2007) A proteomic study of the major allergens from yellow
jacket venoms. Proteomics,
2007 May;7(10):1615-23
Kolarich D, Packer NH (Review Chapter contribution for
Book: "Mass Spectrometry in Nutrition Research", in press) Mass spectrometry
for the analysis of milk oligosaccharides
Kolarich D, Weber A, Turecek PL, Schwarz HP, Altmann F.
(2006) Comprehensive glyco-proteomic analysis of human α1-antitrypsin and
its charge isoforms. Proteomics;6(11):3369-80.
Kolarich D, Weber A, Stadlmann J, Pabst M, Teschner W, Ehrlich H,
Schwarz HP, Altmann F. (2008) Glycoproteomic characterization of
butyrylcholinesterase from human plasma. Proteomics, Jan;8(2):254-63
Kolarich D, Turecek PL, Weber A, Mitterer A, Graninger M,
Matthiessen P, Nicolaes GAF, Altmann F, Schwarz HP, (2006)
Biochemical, molecular characterization and glyco-proteomic analyses of
alpha1-proteinase inhibitor products used for replacement therapy, Transfusion.
Nov;46(11):1959-77
Lee A, Kolarich D, Haynes PA, Jensen PH, Baker MS, Packer
NH (2009) Rat liver membrane glycoproteome: enrichment by phase
partitioning and glycoprotein capture. J Proteome Res. Feb;8(2):770-81
Lee A, Chick JM, Kolarich D, Haynes PA, Robertson GR, Tsoli M,
Jankova L, Clarke SJ, Packer NH, Baker MS (2010) Liver membrane
proteome glycosylation changes in mice bearing an extra-hepatic tumour, Mol Cell Proteomics. Feb 18.
[Epub ahead of print]
Lee A, Nakano M, Hincapie M, Kolarich D, Baker MS, Hancock WS,
Packer NH (2010) The riddle of lectins: do we really know what?s
happening? OMICS,
Aug;14(4):487-99
Leitsch D, Kolarich D, Wilson IBH, Altmann F, Duchêne M
(2007), Nitroimidazole action in Entamoeba histolytica: A central role for
thioredoxin reductase, PLoS Biol.
Aug;5(8):e211
Leitsch D, Kolarich D, Binder M, Stadlmann J, Altmann F, Duchêne
M (2009) Trichomonas vaginalis: metronidazole and other nitroimidazole
drugs are reduced by the flavin enzyme thioredoxin reductase and disrupt the
cellular redox system. Implications for nitroimidazole toxicity and resistance.
Mol
Microbiol. Apr;72(2):518-36
Leitsch D, Kolarich D, Duchêne M (2010) The flavin
inhibitor diphenyleneiodonium renders Trichomonas vaginalis resistant to
metronidazole, inhibits thioredoxin reductase and flavin reductase, and shuts
off hydrogenosomal enzymatic pathways. Mol
Biochem Parasitol. May;171(1):17-24
Pabst M, Kolarich D, Pöltl G, Dalik T, Lubec G, Hofinger A, Altmann
F (2009) Comparison of fluorescent labels for oligosaccharides and
introduction of a new postlabeling purification method. Anal
Biochem. Jan 15;384(2):263-73
Scott NE, Parker BL, Connolly AM, Paulech J, Edwards AVG, Crossett
B, Falconer L, Kolarich D, Djordjevic SP, Højrup P, Packer NH, Larsen MR,
Cordwell SJ, (2010) A comprehensive analysis of the Campylobacter
jejuni N-linked glycoproteome using ZIC-HILIC and graphite enrichment with
fragmentation by CID, HCD and ETD-MS, Mol Cell Proteomics. 2010
Apr 1. [Epub ahead of print]
Stadlmann J, Pabst M, Kolarich D, Kunert R, Altmann F.,
(2008), Analysis of immunoglobulin glycosylation by LC-ESI-MS of glycopeptides
and oligosaccharides, Proteomics,
Jul;8(14):2858-71
Wada Y, Dell A, Haslam SM, Tissot B, Canis K, Azadi P, Bäckström M,
Costello CE, Hansson GC, Hiki Y, Ishihara M, Ito H, Kakehi K, Karlsson N, Kato
K, Kawasaki N, Khoo KH, Kobayashi K, Kolarich D, Kondo A, Lebrilla C, Nakano M,
Narimatsu H, Novak J, Novotny MV, Ohno E, Packer NH, Renfrow MB, Tajiri M,
Thomsson KA, Yagi H, Yu SY, Taniguchi N (2010) Comparison of methods
for profiling O-glycosylation: HUPO Human Disease Glycomics/Proteome Initiative
multi-institutional study of IgA1, Mol
Cell Proteomics Apr;9(4):719-27
Wilson IB, Zeleny R, Kolarich D, Staudacher E, Stroop CJ, Kamerling
JP, Altmann F (2001) Analysis of Asn-linked glycans from
vegetable foodstuffs: widespread occurrence of Lewis a, core alpha1,3-linked
fucose and xylose substitutions. Glycobiology
11: 261-274
Zeleny R, Kolarich D, Strasser R, Altmann F. (2006) Sialic
acid concentrations in plants are in the range of inadvertent contamination. Planta: 224(1):222-7
Zeleny R, Leonard R, Dorfner G, Dalik T, Kolarich D, Altmann
F. (2006) Molecular cloning and characterization of a plant
alpha1,3/4-fucosidase based on sequence tags from almond fucosidase I. Phytochemistry.;67(7):641-8.
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