Journal Article (1008)
2014
Journal Article
107 (5), pp. 1038 - 1039 (2014)
New insights into lipid monolayers from coarse-grained simulation techniques. Biophysical Journal
Journal Article
10 (8), 747 (2014)
Emergence of robust growth laws from optimal regulation of ribosome synthesis. Molecular Systems Biology
Journal Article
30 (18), pp. 5185 - 5192 (2014)
Versatility of a glycosylphosphatidylinositol fragment in forming highly ordered polymorphs. Langmuir
Journal Article
140 (6), 064101 (2014)
Unveiling the hidden structure of complex stochastic biochemical networks. The Journal of Chemical Physics
Journal Article
23 (11), pp. 1508 - 1518 (2014)
Conformational selection in protein binding and function. Protein Science
Journal Article
42 (17), pp. 10987 - 10999 (2014)
Control of transcription elongation by GreA determines rate of gene expression in Streptococcus pneumoniae. Nucleic Acids Research
Journal Article
131 (4), 39895 (2014)
Particle clustering in photocurable nanocomposites: dependence of curing kinetics and viscoelastic properties. Journal of Applied Polymer Science 2013
Journal Article
62, pp. 211 - 221 (2013)
Standard Gibbs energies of formation and equilibrium constants from ab-initio calculations: covalent dimerization of NO2 and synthesis of NH3. The Journal of Chemical Thermodynamics
Journal Article
9 (36), pp. 8642 - 8646 (2013)
Orientational changes and impaired internalization of ellipsoidal nanoparticles by vesicle membranes. Soft Matter
Journal Article
6 (1 SI), pp. 48 - 64 (2013)
Elastic coupling effects in cooperative transport by a pair of molecular motors. Cellular and Molecular Bioengineering
Journal Article
104 (7), pp. 1456 - 1464 (2013)
Phase diagram and tie-line determination for the ternary mixture DOPC/eSM/cholesterol. Biophysical Journal
Journal Article
8 (2), e55366 (2013)
Dwell time distributions of the molecular motor myosin V. PLoS One
Journal Article
14 (3-4), pp. 551 - 563 (2013)
Leukocyte enrichment based on a modified pinched flow fractionation approach. Microfluidics and Nanofluidics
Journal Article
10 (4), 046008 (2013)
Effect of ribosome shielding on mRNA stability. Physical Biology
Journal Article
8 (2), e55442 (2013)
Complex degradation processes lead to non-exponential decay patterns and age-dependent decay rates of messenger RNA. PLoS One
Journal Article
87 (2), 022146 (2013)
Mass transport perspective on an accelerated exclusion process: Analysis of augmented current and unit-velocity phases. Physical Review E
Journal Article
88 (5), 052701 (2013)
Kinetic Monte Carlo approach to RNA folding dynamics using structure-based models. PHYSICAL REVIEW E
Journal Article
15 (3), pp. 876 - 881 (2013)
Effect of tension and curvature on the chemical potential of lipids in lipid aggregates. Physical Chemistry Chemical Physics
Journal Article
425 (12), pp. 2232 - 2246 (2013)
Nucleotide-dependent lateral and longitudinal interactions in microtubules. Journal of Molecular Biology (London)
Journal Article
7 (1), 22 (2013)
Dilution and the theoretical description of growth-rate dependent gene expression. Journal of Biological Engineering
Journal Article
110 (38), pp. 15283 - 15288 (2013)
Binding constants of membrane-anchored receptors and ligands depend strongly on the nanoscale roughness of membranes. Proceedings of the National Academy of Sciences of the United States of America
Journal Article
117 (43), pp. 13457 - 13463 (2013)
Free energy barrier for melittin reorientation from a membrane-bound state to a transmembrane state. The Journal of Physical Chemistry B
Journal Article
104 (12), pp. 2778 - 2779 (2013)
On Phosphate Release in Actin Filaments. Biophysical Journal
Journal Article
42 (Suppl. 1), p. S112 - S112 (2013)
Conformational insights into recognition mechanism of O-antigen polysaccharides by tailspike protein. European Biophysics Journal with Biophysics Letters
Journal Article
117 (19), pp. 5793 - 5805 (2013)
Importance of polar solvation and configurational entropy for design of antiretroviral drugs targeting HIV-1 protease. The Journal of Physical Chemistry B
Journal Article
150 (2), pp. 205 - 234 (2013)
Network complexity and parametric simplicity for cargo transport by two molecular motors. Journal of Statistical Physics
Journal Article
105 (12), pp. 2613 - 2614 (2013)
A Superresolution Census of RNA Polymerase. Biophysical Journal
Journal Article
110 (42), pp. 16754 - 16759 (2013)
Molecular crowding limits translation and cell growth. Proceedings of the National Academy of Sciences of the United States of America
Journal Article
104 (4), pp. 818 - 824 (2013)
Specific binding of chloride ions to lipid vesicles and implications at molecular scale. Biophysical Journal
Journal Article
29 (25), pp. 7939 - 7948 (2013)
Macro- versus microscopic view on the electrokinetics of a water-membrane interface. Langmuir
Journal Article
104 (3), pp. 666 - 676 (2013)
Bifurcation of velocity distributions in cooperative transport of filaments by fast and slow motors. Biophysical Journal
Journal Article
161, pp. 305 - 331 (2013)
Spontaneous tubulation of membranes and vesicles reveals membrane tension generated by spontaneous curvature. Faraday Discussions
Journal Article
9 (35), pp. 8438 - 8453 (2013)
Domain formation in cholesterol-phospholipid membranes exposed to adhesive surfaces or environments. Soft Matter
Journal Article
29 (47), pp. 14545 - 14551 (2013)
Insights on the interactions of chitosan with phospholipid vesicles. Part I: effect of polymer deprotonation. Langmuir
Journal Article
29 (47), pp. 14552 - 14559 (2013)
insights on the interactions of chitosan with phospholipid vesicles. Part II: membrane stiffening and pore formation. Langmuir
Journal Article
139 (9), 094903 (2013)
Temperature-sensitive colloidal phase behavior induced by critical Casimir forces. JOURNAL OF CHEMICAL PHYSICS
Journal Article
8 (2), e57916 (2013)
Direct observation of membrane insertion by enveloped virus matrix proteins by phosphate displacement. PLoS One
Journal Article
8 (5), e62814 (2013)
Population dynamics of bacterial persistence. PLoS One
Journal Article
139 (1), 015102 (2013)
Identification of slow molecular order parameters for Markov model construction. The Journal of Chemical Physics
Journal Article
14 (1), pp. 2203 - 2229 (2013)
Adhesion-Induced Phase Behavior of Two-Component Membranes and Vesicles. International Journal of Molecular Sciences
Journal Article
25 (37), 374104 (2013)
Backtracking dynamics of RNA polymerase: pausing and error correction. Journal of Physics: Condensed Matter
Journal Article
15 (33), pp. 13991 - 13998 (2013)
Negligible water surface charge determined using Kelvin probe and total reflection X-ray fluorescence techniques. Physical Chemistry Chemical Physics
Journal Article
9 (45), pp. 10705 - 10718 (2013)
Interbilayer repulsion forces between tension-free lipid bilayers from simulation. Soft Matter
Journal Article
104 (2 Suppl. 1), p. 480A - 480A (2013)
'Marker of self', CD47, modulates mechanical forces imposed by macrophages during phagocytosis. Biophysical Journal
Journal Article
85 (19), pp. 8902 - 8909 (2013)
Electrochemical Detection of Single Microbeads Manipulated by Optical Tweezers in the Vicinity of Ultramicroelectrodes. Analytical Chemistry
Journal Article
117 (39), pp. 11753 - 11764 (2013)
The Free OD at the Air/D2O Interface is Structurally and Dynamically Heterogeneous. The Journal of Physical Chemistry B
Journal Article
13 (11), pp. 5373 - 5378 (2013)
Selecting for function: solution synthesis of magnetic nanopropellers. Nano Letters
Journal Article
117, pp. 10556 - 10566 (2013)
Cooperative slowdown of water rotation near densely charged ions is intense but short-ranged. The Journal of Physical Chemistry B
Journal Article
1834 (5), pp. 867 - 873 (2013)
How conformational changes can affect catalysis, inhibition and drug resistance of enzymes with induced-fit binding mechanism such as the HIV-1 protease. Biochimica et Biophysica Acta: Proteins and Proteomics 2012
Journal Article
109 (18), 188102 (2012)
Tubulation and aggregation of spherical nanoparticles adsorbed on vesicles. Physical Review Letters
Journal Article
97 (2), 28006 (2012)
Grafted polyelectrolyte in strong electric field under load: field-regulated force and chain contraction. EPL
Journal Article
45 (11), pp. 4772 - 4777 (2012)
Solution behavior of double-hydrophilic block copolymers in dilute aqueous solution. Macromolecules
Journal Article
7 (4), e35044 (2012)
Transient Phenomena in Gene Expression after Induction of Transcription. PLoS One
Journal Article
16, pp. 1 - 50 (2012)
Giant vesicles: a biomimetic tool for membrane characterization. Advances in Planar Lipid Bilayers and Liposomes
Journal Article
8 (24), pp. 2409 - 2415 (2012)
Lipid membranes in contact with aqueous phases of polymer solutions. Soft Matter
Journal Article
109 (13), 130602 (2012)
Entrainment and unit velocity: surprises in an accelerated exclusion process. Physical Review Letters
Journal Article
586 (19), pp. 3336 - 3340 (2012)
tRNA concentration fine tunes protein solubility. FEBS Letters
Journal Article
103 (5), pp. 1078 - 1086 (2012)
Cell-to-cell diversity in a synchronized Chlamydomonas culture as revealed by single-cell analyses. Biophysical Journal
Journal Article
8 (10), pp. 2833 - 2843 (2012)
Assembly of nano-particles on diblock copolymer brushes: toward laterally nano-structured composites. Soft Matter
Journal Article
21 (4), pp. 441 - 449 (2012)
The glomerular filtration barrier function: new concepts. Current Opinion in Nephrology and Hypertension
Journal Article
116 (22), pp. 6269 - 6278 (2012)
Energetics of mutation-induced changes in potency of lersivirine against HIV-1 reverse transcriptase. Journal of Physical Chemistry B
Journal Article
116 (21), pp. 6137 - 6149 (2012)
Mutation-induced loop opening and energetics for binding of tamiflu to influenza N8 neuraminidase. Journal of Physical Chemistry B
Journal Article
116 (8), pp. 2605 - 2614 (2012)
Origin of decrease in potency of darunavir and two related antiviral inhibitors against HIV-2 compared to HIV-1 protease. Journal of Physical Chemistry B
Journal Article
26 (2), pp. 215 - 232 (2012)
Energetic basis for drug resistance of HIV-1 protease mutants against amprenavir. Journal of Computer-Aided Molecular Design
Journal Article
137 (8), 084106 (2012)
Single-molecule stochastic times in a reversible bimolecular reaction. The Journal of Chemical Physics
Journal Article
T151, 014066 (2012)
Mechanisms and economy of molecular machines. Physica Scripta
Journal Article
7, e48542 (2012)
On ribosome load, codon usage and protein abundance. PLoS One
Journal Article
7 (3), e33562 (2012)
Interplay of magnetic interactions and active movements in the formation of magnetosome chains. PLoS One
Journal Article
7 (3), e32753 (2012)
Curvature of double-membrane organelles generated by changes in membrane size and composition. PLoS One
Journal Article
108 (12), 126102 (2012)
Nonisomorphic nucleation pathways arising from morphological transitions of liquid channels. Physical Review Letters
Journal Article
22, pp. 381 - 391 (2012)
Interplay between population dynamics and drug tolerance in Staphylococcus aureus persister cells. Journal of Molecular Microbiology and Biotechnology
Journal Article
7 (8), e43219 (2012)
Critical motor number for fractional steps of cytoskeletal filaments in gliding assays. PLoS One
Journal Article
116 (6), pp. 1819 - 1823 (2012)
Wetting-induced budding of vesicles in contact with several aqueous phases. The Journal of Physical Chemistry B
Journal Article
28 (8), pp. 3831 - 3839 (2012)
Concentration dependence of the interfacial tension for aqueous two-phase polymer solutions of dextran and polyethylene glycol. Langmuir
Journal Article
148 (4), pp. 607 - 626 (2012)
Deterministic and stochastic descriptions of gene expression dynamics. Journal of Statistical Physics
Journal Article
T151, 014068 (2012)
Sources of stochasticity in constitutive and autoregulated gene expression. Physica Scripta
Journal Article
116 (34), pp. 10259 - 10265 (2012)
Assessing polyglutamine conformation in the nucleating event by molecular dynamics simulations. The Journal of Physical Chemistry B
Journal Article
109 (27), pp. 10769 - 10774 (2012)
Intermittent depolymerization of actin filaments is caused by photo-induced dimerization of actin protomers. Proceedings of the National Academy of Sciences of the United States of America
Journal Article
8 (10), e1002736 (2012)
Membrane-elasticity model of coatless vesicle budding induced by ESCRT complexes. PLoS Computational Biology
Journal Article
134 (28), pp. 11652 - 11658 (2012)
Self-assembly of stable monomolecular nucleic acid lipid particles with a size of 30 nm. Journal of the American Chemical Society
Journal Article
97 (2), 28009 (2012)
Quantitative approach to the stochastics of bone remodeling. EPL
Journal Article
8 (14), pp. 3810 - 3816 (2012)
Electrodeformation method for measuring the capacitance of bilayer membranes. Soft Matter
Journal Article
51, pp. 12874 - 12878 (2012)
Subgel phase structure in monolayers of glycosylphosphatidylinositol glycolipids. Angewandte Chemie International Edition
Journal Article
8, pp. 11737 - 11745 (2012)
Adhesion of surfaces mediated by adsorbed particles: Monte Carlo simulations and a general relationship between adsorption isotherms and effective adhesion energies. Soft Matter
Journal Article
116 (31), pp. 9467 - 9481 (2012)
Statics and dynamics of free and hydrogen-bonded OH groups at the air/water interface. The Journal of Physical Chemistry B
Journal Article
1818 (9), pp. 2192 - 2201 (2012)
Antimicrobial selectivity based on zwitterionic lipids and underlying balance of interactions. Biochimica et Biophysica Acta: BBA
Journal Article
134 (46), pp. 18964 - 18972 (2012)
Mechanical compressibility of the glycosylphosphatidylinositol (GPI) anchor backbone governed by independent glycosidic linkages. Journal of the American Chemical Society
Journal Article
80 (10), pp. 2369 - 2383 (2012)
Conformational selection and induced changes along the catalytic cycle of Escherichia coli dihydrofolate reductase. Proteins: Structure, Function, and Bioinformatics
Journal Article
40 (11), e83 (2012)
FANSe: an accurate algorithm for quantitative mapping of large scale sequencing reads. Nucleic Acids Research (London) 2011
Journal Article
39 (5), pp. 1211 - 1215 (2011)
Co-operative transport by molecular motors. Biochemical Society Transactions
Journal Article
100 (7), pp. 1747 - 1755 (2011)
Chemomechanical coupling and motor cycles of myosin V. Biophysical Journal
Journal Article
135 (10), 105101 (2011)
Polymerization of actin filaments coupled with adenosine triphosphate hydrolysis: brownian dynamics and theoretical analysis. The Journal of Chemical Physics
Journal Article
44 (3), pp. 671 - 682 (2011)
Mesoscopic simulations of morphological transitions of stimuli-responsive diblock copolymer brushes. Macromolecules
Journal Article
7 (13), pp. 6092 - 6102 (2011)
Vesicles with multiple membrane domains. Soft Matter
Journal Article
1808 (1), pp. 446 - 453 (2011)
The intrinsically disordered late embryogenesis abundant protein LEA18 from Arabidopsis thaliana modulates membrane stability through binding and folding. Biochimica et Biophysica Acta: BBA
Journal Article
100 (3 Suppl 1,2), pp. 33a - 34a (2011)
Observation of Individual Actin Filaments Reveals that ATP Hydrolysis is a Random Mechanism. Observation of Individual Actin Filaments Reveals that ATP Hydrolysis is a Random Mechanism
Journal Article
9 (9), e1001161 (2011)
Individual actin filaments in a microfluidic flow reveal the mechanism of ATP hydrolysis and give insight into the properties of profilin. PLoS Biology
Journal Article
115 (23), pp. 7661 - 7669 (2011)
Importance of polar solvation for cross-reactivity of antibody and its variants with steroids. The Journal of Physical Chemistry B
Journal Article
115 (38), pp. 10587 - 10595 (2011)
Validating affinities for ion-lipid association from simulation against experiment. Journal of Physical Chemistry A