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Journal Article (88)

2013
Journal Article
Berger, F.; Keller, C.; Lipowsky, R.; Klumpp, S.: Elastic Coupling Effects in Cooperative Transport by a Pair of Molecular Motors. Cellular and Molecular Bioengineering 6 (1 Sp. Iss. SI), pp. 48 - 64 (2013)
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Dong, J. J.; Klumpp, S.; Zia, R. K. P.: Mass transport perspective on an accelerated exclusion process: Analysis of augmented current and unit-velocity phases. Physical Review E 87 (2), 022146 (2013)
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Faber, M.; Klumpp, S.: Kinetic Monte Carlo approach to RNA folding dynamics using structure-based models. PHYSICAL REVIEW E 88 (5), 052701 (2013)
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Hintsche, M.; Klumpp, S.: Dilution and the theoretical description of growth-rate dependent gene expression. Journal of Biological Engineering 7 (1), 22 (2013)
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Klumpp, S.: A Superresolution Census of RNA Polymerase. Biophysical Journal 105 (12), pp. 2613 - 2614 (2013)
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Klumpp, S.; Scott, M.; Pedersen, S.; Hwa, T.: Molecular crowding limits translation and cell growth. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 110 (42), pp. 16754 - 16759 (2013)
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Patra, P.; Klumpp, S.: Population Dynamics of Bacterial Persistence. PLoS One 8 (5), e62814 (2013)
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Sahoo, M.; Klumpp, S.: Backtracking dynamics of RNA polymerase: pausing and error correction. Journal of Physics: Condensed Matter 25 (37), 374104 (2013)
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Vach, P. J.; Brun, N.; Bennet, M.; Bertinetti, L.; Widdrat, M.; Baumgartner, J.; Klumpp, S.; Fratzl, P.; Faivre, D.: Selecting for function: solution synthesis of magnetic nanopropellers. Nano Letters 13 (11), pp. 5373 - 5378 (2013)
2012
Journal Article
Dong, J. J.; Klumpp, S.; Zia, R. K. P.: Entrainment and Unit Velocity: Surprises in an Accelerated Exclusion Process. Physical Review Letters 109 (13), 130602 (2012)
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Klumpp, S.: Mechanisms and economy of molecular machines. Physica Scripta T151, 014066 (2012)
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Klumpp, S.; Dong, J. J.; Hwa, T.: On ribosome load, codon usage and protein abundance. PLoS One 7, e48542 (2012)
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Klumpp, S.; Faivre, D.: Interplay of Magnetic Interactions and Active Movements in the Formation of Magnetosome Chains. PLoS One 7 (3), e33562 (2012)
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Lechner, S.; Patra, P.; Klumpp, S.; Bertram, R.: Interplay between population dynamics and drug tolerance in Staphylococcus aureus persister cells. Journal of Molecular Microbiology and Biotechnology 22, pp. 381 - 391 (2012)
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Marathe, R.; Bierbaum, V.; Gomez, D.; Klumpp, S.: Deterministic and Stochastic Descriptions of Gene Expression Dynamics. Journal of Statistical Physics 148 (4), pp. 607 - 626 (2012)
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Marathe, R.; Gomez, D.; Klumpp, S.: Sources of stochasticity in constitutive and autoregulated gene expression. Physica Scripta T151, 014068 (2012)
2011
Journal Article
Berger, F.; Keller, C.; Müller, M. J. I.; Klumpp, S.; Lipowsky, R.: Co-operative transport by molecular motors. BIOCHEMICAL SOCIETY TRANSACTIONS 39, pp. 1211 - 1215 (2011)
Journal Article
Klumpp, S.: Growth-Rate Dependence Reveals Design Principles of Plasmid Copy Number Control. PLoS ONE 6 (5), e20403 (2011)
Journal Article
Klumpp, S.: Pausing and Backtracking in Transcription Under Dense Traffic Conditions. Journal of Statistical Physics 142 (6), pp. 1252 - 1267 (2011)
Journal Article
Sahoo, M.; Klumpp, S.: Transcriptional proofreading in dense RNA polymerase traffic. EPL 96 (6), 60004 (2011)
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