Publikationen

M Michael Rading, Michael Sandmann, Martin Steup, Davide Chiarugi, Angelo Valleriani
Why are cellular features, such as volume and starch content, only weakly correlated in synchronized photoautotrophic cell suspensions?
(submitted, under review)

Celine Sin, Davide Chiarugi, Angelo Valleriani
Single-molecule modeling of mRNA degradation by miRNA: Lessons from data
BMC Systems Biology (in press)

Peter Keller, Sylvie Roelly, Angelo Valleriani
On time duality for Markov chains
Stochastic Models (in press)

2014

Xin Li, Anatoly B Kolomeisky, Angelo Valleriani
Stochastic kinetics on networks: When slow is fast
Journal of Physical Chemistry B, 118 (2014) 10419-10425

Xin Li, Anatoly B Kolomeisky, Angelo Valleriani
Pathway structure determination in complex stochastic networks with non-exponential dwell times
Journal of Chemical Physics, 140 (2014) 184102

Angelo Valleriani, Xin Li, Anatoly B Kolomeisky
Unveiling the hidden structure of complex stochastic biochemical networks
Journal of Chemical Physics 140 (2014) 064101

2013

Peter Keller, Sylvie Roelly, Angelo Valleriani
A Quasi Random Walk to Model a Biological Transport Process
Methodology and Computing in Applied Probability DOI 10.1007/s11009-013-9372-5

Carlus Deneke, Reinhard Lipowsky, Angelo Valleriani
Effect of ribosome shielding on mRNA stability
Physical Biology 10 (2013) 046008

Carlus Deneke, Reinhard Lipowsky, Angelo Valleriani
Complex degradation processes lead to non-exponential decay patterns and age-dependent decay rates of messenger RNA
PLoS ONE, 8 (2013) e55442 Access the recommendation on F1000Prime

2012

Peter Keller, Angelo Valleriani
Single-molecule stochastic times in a reversible bimolecular reaction
Journal of Chemical Physics, 127 (2012) 084106

Gong Zhang, Ivan Fedyunin, Sebastian Kirchner, Chuanle Xiao, Angelo Valleriani, Zoya Ignatova
FANSe: an accurate algorithm for quantitative mapping of large scale sequencing reads
Nucleic Acid Research, 40 (2012) e83

Carlus Deneke, Sophia Rudorf, Angelo Valleriani
Transient Phenomena in Gene Expression after Induction of Transcription
PLoS ONE, 7 (2012) e35044

Marco Rusconi, Angelo Valleriani, John W.C. Dunlop, Jürgen Kurths, Richard Weinkamer
Quantitative approach to the stochastics of bone remodeling
EPL, 97 (2012) 28009

2011

Apoorva Nagar, Angelo Valleriani, Reinhard Lipowsky
Translation by Ribosomes with mRNA Degradation: Exclusion Processes on Aging Tracks
Journal of Statistical Physics, 145 (2011) 1385-1404

Michael M. Rading, Tatiana A. Engel, Reinhard Lipowsky, Angelo Valleriani
Stationary Size Distribution of Growing Cells with Binary and Multiple Cell Division
Journal of Statistical Physics, 145 (2011) 1-22

Jörg Menche, Angelo Valleriani, Reinhard Lipowsky
Sequences of phase transitions in Ising models on correlated networks
Physical Review E, 83 (2011) 061129

Angelo Valleriani, Gong Zhang, Apoorva Nagar, Zoya Ignatova, Reinhard Lipowsky
Length-dependent translation of messenger RNA by ribosomes
Physical Review E, 83 (2011) 042903

2010

Gong Zhang, Ivan Fedyunin, Oskar Miekley, Angelo Valleriani, Alessandro Moura, Zoya Ignatova
Global and local depletion of ternary complex limits translational elongation 
Nucleic Acid Research, 38 (2010) 4778-4787

Jörg Menche, Angelo Valleriani, Reinhard Lipowsky
Asymptotic properties of degree-correlated scale-free networks
Physical Review E, 81 (2010) 046103

Angelo Valleriani, Zoya Ignatova, Apoorva Nagar, Reinhard Lipowsky
Turnover of messenger RNA: Polysome statistics beyond the steady state
EPL, 89 (2010) 58003

Jörg Menche, Angelo Valleriani, Reinhard Lipowsky
Dynamical processes on dissortative scale-free networks
EPL, 89 (2010) 18002

2009


Reinhard Lipowsky, Steffen Liepelt, Angelo Valleriani
Energy Conversion by Molecular Motors Coupled to Nucleotide Hydrolysis
Journal of Statistical Physics, 135 (2009) 951-975

Reinhard Lipowsky, Angelo Valleriani
Editorial: "Active Biomimetic Systems: Force Generation and Cargo Transport by Molecular Machines"
Biophysical Reviews and Letters, 4 (2009) 1-4

Reinhard Lipowsky, Janina Beeg, Rumiana Dimova, Stefan Klumpp, Steffen Liepelt, Melanie J.I. Müller, Angelo Valleriani
Active Bio-Systems: From Single motor Molecules to Cooperative Cargo
Biophysical Reviews and Letters, 4 (2009) 77-137

2008

Angelo Valleriani, Steffen Liepelt, Reinhard Lipowsky
Dwell time distributions for kinesin's mechanical steps
EPL, 82 (2008) 28011

2007

Angelo Valleriani, Torsten Meene
Multilevel selection in a gradient
Ecological Modelling, 208 (2007) 159-164

2006

Angelo Valleriani
Evolutionarily stable germination strategies with time-correlated yield
Theoretical Population Biology, 70 (2006) 255-261

Angelo Valleriani, Katja Tielbörger
Effect of age on germination of dormant seeds
Theoretical Population Biology, 70 (2006) 1-9

2005

Katja Tielbörger, Angelo Valleriani
Can seeds predict their future? Germination strategies of density-regulated desert annuals
OIKOS, 111 (2005) 235-244

Angelo Valleriani
Algebraic determination of the evolutionary stable germination fraction
Theoretical Population Biology, 68 (2005) 197-203

Ugo Bastolla, Michael Lässig, Susanna C. Manrubia, Angelo Valleriani
Biodiversity in model ecosystems, I: coexistence conditions for competing species
Journal of Theoretical Biology, 235 (2005) 521-530

Ugo Bastolla, Michael Lässig, Susanna C. Manrubia, Angelo Valleriani
Biodiversity in model ecosystems, II: species assembly and food web structure
Journal of Theoretical Biology, 235 (2005) 531-539

2001

Ugo Bastolla, Michael Lässig, Susanna C. Manrubia, Angelo Valleriani
Diversity patterns from ecological models at dynamic equilibrium
Journal of Theoretical Biology, 212 (2001) 11-34

Michael Lässig, Ugo Bastolla, Susanna C. Manrubia, Angelo Valleriani
Shape of ecological networks
Physical Review Letters, 86 (2001) 4418-4421

Gianaurelio Cuniberti, Angelo Valleriani, José Luis Vega
Effects of regulation on a self-organized market
Quantitative Finance, 1 (2001) 332-5

1999

Raffaele Cafiero, Paolo De Los Rios, Angelo Valleriani, José Luis Vega
Levy-nearest-neighbors Bak-Sneppen model
Physical Review E, 60 (1999) R1111-R1114

Raffaele Cafiero, Angelo Valleriani, José Luis Vega
Damage-spreading in the parallel Bak-Sneppen model
European Physical Journal B, 7 (1999) 505-508

Angelo Valleriani, José Luis Vega
Damage spreading in the Bak-Sneppen model
Journal of Physics A, 32 (1999) 105-114

1998

Raffaele Cafiero, Paolo De Los Rios, F.M. Dittes, Angelo Valleriani, José Luis Vega
Power-law behavior in a non-extremal Bak-Sneppen model
Physical Review E, 58 (1998) 3993-3996

Raffaele Cafiero, Angelo Valleriani, José Luis Vega
Damage-spreading in the Bak-Sneppen model without noise
European Physical Journal B, 4 (1998) 405-408

Matteo Marsili, Angelo Valleriani
Self organization of interactin Polya urns
European Physical Journal B, 3 (1998) 417-420

Paolo De Los Rios, Angelo Valleriani, José Luis Vega
Self-organized criticality in deterministic systems with disorder
Physical Review E, 57 (1998) 6451-6459

1997

Paolo De Los Rios, Angelo Valleriani, José Luis Vega
Self-organized criticality driven by deterministic rules
Physical Review E, 56 (1997) 4876-4879

Carlo Acerbi, Giuseppe Mussardo, Angelo Valleriani
On the form factors of relevant operators and their cluster property
Journal of Physics A, 30 (1997) 2895-2913

1996

Carlo Acerbi, Angelo Valleriani, Giuseppe Mussardo
Form factors and correlation functions of the stress-energy tensor in massive deformation of the minimal models (E(n))(1)circle times(E(n))(1)/(E(n))(2)
International Journal of Modern Physics A, 11 (1996) 5327-5364

Angelo Valleriani
Random walk with a boundary line as a free massive boson with a defect line
Journal of Physics A, 29 (1996) 4885-4893

1993

Francesco Ravanini, Angelo Valleriani, Roberto Tateo
Dynkin TBA's
International Journal of Modern Physics A, 8 (1993) 1707-1727

1992

Francesco Ravanini, Roberto Tateo, Angelo Valleriani
A new family of diagonal ADE-related scattering theories
Physics Letters B, 193 (1992) 3-4

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