Publikationen
M Michael Rading, Michael Sandmann, Martin Steup, Davide Chiarugi, Angelo Valleriani
Why are cellular features, such as volume and starch content, only weakly correlated in synchronized photoautotrophic cell suspensions?
(submitted, under review)
Celine Sin, Davide Chiarugi, Angelo Valleriani
Single-molecule modeling of mRNA degradation by miRNA: Lessons from data
BMC Systems Biology (in press)
Peter Keller, Sylvie Roelly, Angelo Valleriani
On time duality for Markov chains
Stochastic Models (in press)
2014
Xin Li, Anatoly B Kolomeisky, Angelo Valleriani
Stochastic kinetics on networks: When slow is fast
Journal of Physical Chemistry B, 118 (2014) 10419-10425
Xin Li, Anatoly B Kolomeisky, Angelo Valleriani
Pathway structure determination in complex stochastic networks with non-exponential dwell times
Journal of Chemical Physics, 140 (2014) 184102
Angelo Valleriani, Xin Li, Anatoly B Kolomeisky
Unveiling the hidden structure of complex stochastic biochemical networks
Journal of Chemical Physics 140 (2014) 064101
2013
Peter Keller, Sylvie Roelly, Angelo Valleriani
A Quasi Random Walk to Model a Biological Transport Process
Methodology and Computing in Applied Probability DOI 10.1007/s11009-013-9372-5
Carlus Deneke, Reinhard Lipowsky, Angelo Valleriani
Effect of ribosome shielding on mRNA stability
Physical Biology 10 (2013) 046008
Carlus Deneke, Reinhard Lipowsky, Angelo Valleriani
Complex degradation processes lead to non-exponential decay patterns and age-dependent decay rates of messenger RNA
PLoS ONE, 8 (2013) e55442
2012
Peter Keller, Angelo Valleriani
Single-molecule stochastic times in a reversible bimolecular reaction
Journal of Chemical Physics, 127 (2012) 084106
Gong Zhang, Ivan Fedyunin, Sebastian Kirchner, Chuanle Xiao, Angelo Valleriani, Zoya Ignatova
FANSe: an accurate algorithm for quantitative mapping of large scale sequencing reads
Nucleic Acid Research, 40 (2012) e83
Carlus Deneke, Sophia Rudorf, Angelo Valleriani
Transient Phenomena in Gene Expression after Induction of Transcription
PLoS ONE, 7 (2012) e35044
Marco Rusconi, Angelo Valleriani, John W.C. Dunlop, Jürgen Kurths, Richard Weinkamer
Quantitative approach to the stochastics of bone remodeling
EPL, 97 (2012) 28009
2011
Apoorva Nagar, Angelo Valleriani, Reinhard Lipowsky
Translation by Ribosomes with mRNA Degradation: Exclusion Processes on Aging Tracks
Journal of Statistical Physics, 145 (2011) 1385-1404
Michael M. Rading, Tatiana A. Engel, Reinhard Lipowsky, Angelo Valleriani
Stationary Size Distribution of Growing Cells with Binary and Multiple Cell Division
Journal of Statistical Physics, 145 (2011) 1-22
Jörg Menche, Angelo Valleriani, Reinhard Lipowsky
Sequences of phase transitions in Ising models on correlated networks
Physical Review E, 83 (2011) 061129
Angelo Valleriani, Gong Zhang, Apoorva Nagar, Zoya Ignatova, Reinhard Lipowsky
Length-dependent translation of messenger RNA by ribosomes
Physical Review E, 83 (2011) 042903
2010
Gong Zhang, Ivan Fedyunin, Oskar Miekley, Angelo Valleriani, Alessandro Moura, Zoya Ignatova
Global and local depletion of ternary complex limits translational elongation
Nucleic Acid Research, 38 (2010) 4778-4787
Jörg Menche, Angelo Valleriani, Reinhard Lipowsky
Asymptotic properties of degree-correlated scale-free networks
Physical Review E, 81 (2010) 046103
Angelo Valleriani, Zoya Ignatova, Apoorva Nagar, Reinhard Lipowsky
Turnover of messenger RNA: Polysome statistics beyond the steady state
EPL, 89 (2010) 58003
Jörg Menche, Angelo Valleriani, Reinhard Lipowsky
Dynamical processes on dissortative scale-free networks
EPL, 89 (2010) 18002
2009
Reinhard Lipowsky, Steffen Liepelt, Angelo Valleriani
Energy Conversion by Molecular Motors Coupled to Nucleotide Hydrolysis
Journal of Statistical Physics, 135 (2009) 951-975
Reinhard Lipowsky, Angelo Valleriani
Editorial: "Active Biomimetic Systems: Force Generation and Cargo Transport by Molecular Machines"
Biophysical Reviews and Letters, 4 (2009) 1-4
Reinhard Lipowsky, Janina Beeg, Rumiana Dimova, Stefan Klumpp, Steffen Liepelt, Melanie J.I. Müller, Angelo Valleriani
Active Bio-Systems: From Single motor Molecules to Cooperative Cargo
Biophysical Reviews and Letters, 4 (2009) 77-137
2008
Angelo Valleriani, Steffen Liepelt, Reinhard Lipowsky
Dwell time distributions for kinesin's mechanical steps
EPL, 82 (2008) 28011
2007
Angelo Valleriani, Torsten Meene
Multilevel selection in a gradient
Ecological Modelling, 208 (2007) 159-164
2006
Angelo Valleriani
Evolutionarily stable germination strategies with time-correlated yield
Theoretical Population Biology, 70 (2006) 255-261
Angelo Valleriani, Katja Tielbörger
Effect of age on germination of dormant seeds
Theoretical Population Biology, 70 (2006) 1-9
2005
Katja Tielbörger, Angelo Valleriani
Can seeds predict their future? Germination strategies of density-regulated desert annuals
OIKOS, 111 (2005) 235-244
Angelo Valleriani
Algebraic determination of the evolutionary stable germination fraction
Theoretical Population Biology, 68 (2005) 197-203
Ugo Bastolla, Michael Lässig, Susanna C. Manrubia, Angelo Valleriani
Biodiversity in model ecosystems, I: coexistence conditions for competing species
Journal of Theoretical Biology, 235 (2005) 521-530
Ugo Bastolla, Michael Lässig, Susanna C. Manrubia, Angelo Valleriani
Biodiversity in model ecosystems, II: species assembly and food web structure
Journal of Theoretical Biology, 235 (2005) 531-539
2001
Ugo Bastolla, Michael Lässig, Susanna C. Manrubia, Angelo Valleriani
Diversity patterns from ecological models at dynamic equilibrium
Journal of Theoretical Biology, 212 (2001) 11-34
Michael Lässig, Ugo Bastolla, Susanna C. Manrubia, Angelo Valleriani
Shape of ecological networks
Physical Review Letters, 86 (2001) 4418-4421
Gianaurelio Cuniberti, Angelo Valleriani, José Luis Vega
Effects of regulation on a self-organized market
Quantitative Finance, 1 (2001) 332-5
1999
Raffaele Cafiero, Paolo De Los Rios, Angelo Valleriani, José Luis Vega
Levy-nearest-neighbors Bak-Sneppen model
Physical Review E, 60 (1999) R1111-R1114
Raffaele Cafiero, Angelo Valleriani, José Luis Vega
Damage-spreading in the parallel Bak-Sneppen model
European Physical Journal B, 7 (1999) 505-508
Angelo Valleriani, José Luis Vega
Damage spreading in the Bak-Sneppen model
Journal of Physics A, 32 (1999) 105-114
1998
Raffaele Cafiero, Paolo De Los Rios, F.M. Dittes, Angelo Valleriani, José Luis Vega
Power-law behavior in a non-extremal Bak-Sneppen model
Physical Review E, 58 (1998) 3993-3996
Raffaele Cafiero, Angelo Valleriani, José Luis Vega
Damage-spreading in the Bak-Sneppen model without noise
European Physical Journal B, 4 (1998) 405-408
Matteo Marsili, Angelo Valleriani
Self organization of interactin Polya urns
European Physical Journal B, 3 (1998) 417-420
Paolo De Los Rios, Angelo Valleriani, José Luis Vega
Self-organized criticality in deterministic systems with disorder
Physical Review E, 57 (1998) 6451-6459
1997
Paolo De Los Rios, Angelo Valleriani, José Luis Vega
Self-organized criticality driven by deterministic rules
Physical Review E, 56 (1997) 4876-4879
Carlo Acerbi, Giuseppe Mussardo, Angelo Valleriani
On the form factors of relevant operators and their cluster property
Journal of Physics A, 30 (1997) 2895-2913
1996
Carlo Acerbi, Angelo Valleriani, Giuseppe Mussardo
Form factors and correlation functions of the stress-energy tensor in massive deformation of the minimal models (E(n))(1)circle times(E(n))(1)/(E(n))(2)
International Journal of Modern Physics A, 11 (1996) 5327-5364
Angelo Valleriani
Random walk with a boundary line as a free massive boson with a defect line
Journal of Physics A, 29 (1996) 4885-4893
1993
Francesco Ravanini, Angelo Valleriani, Roberto Tateo
Dynkin TBA's
International Journal of Modern Physics A, 8 (1993) 1707-1727
1992
Francesco Ravanini, Roberto Tateo, Angelo Valleriani
A new family of diagonal ADE-related scattering theories
Physics Letters B, 193 (1992) 3-4