Publications
Journal Article (86)
1.
Journal Article
18 (3), 034014 (2022)
Optimal cargo size for active diffusion of biohybrid microcarriers. Physical Review Applied 2.
Journal Article
118 (17), 174102 (2021)
Opportunities and utilization of branching and step-out behavior in magnetic microswimmers with a nonlinear response. Applied Physics Letters 3.
Journal Article
44 (3), 40 (2021)
Stokesian dynamics simulations of a magnetotactic bacterium. The European Physical Journal E 4.
Journal Article
2 (10), 2000078 (2020)
Selection for function: from chemically synthesized prototypes to 3D-printed microdevices. Advanced Intelligent Systems 5.
Journal Article
15 (12), e1007548 (2019)
Chemotaxis in external fields: simulations for active magnetic biological matter. PLoS Computational Biology 6.
Journal Article
10 (24), pp. 7650 - 7656 (2019)
On protein folding in crowded conditions. The Journal of Physical Chemistry Letters 7.
Journal Article
789, pp. 1 - 54 (2019)
Swimming with magnets: from biological organisms to synthetic devices. Physics Reports: Review Section of Physics Letters 8.
Journal Article
19 (11), pp. 8207 - 8215 (2019)
Decoding biomineralization: interaction of a Mad10 derived-peptide with magnetite thin films. Nano Letters 9.
Journal Article
19 (5), pp. 3370 - 3378 (2019)
Is F1-ATPase a rotary motor with nearly 100% efficiency? Quantitative analysis of chemomechanical coupling and mechanical slip. Nano Letters 10.
Journal Article
5, 109 (2018)
Bead-based hydrodynamic simulations of rigid magnetic micropropellers. Frontiers in Robotics and AI 11.
Journal Article
13 (1), e0190265 (2018)
Self-organization and stability of magnetosome chains—a simulation study. PLoS One 12.
Journal Article
114 (2), pp. 484 - 492 (2018)
Simulating genetic circuits in bacterial populations with growth heterogeneity. Biophysical Journal 13.
Journal Article
113 (3), pp. 637 - 644 (2017)
Magnetosome organization in magnetotactic bacteria unraveled by ferromagnetic resonance spectroscopy. Biophysical Journal 14.
Journal Article
12 (1), e0169703 (2017)
Modeling sRNA-regulated plasmid maintenance. PLoS One 15.
Journal Article
18 (16), pp. 11184 - 11192 (2016)
Facilitated diffusion in the presence of obstacles on the DNA. Physical Chemistry Chemical Physics 16.
Journal Article
225 (11), pp. 2173 - 2188 (2016)
Magnetotactic bacteria: magnetic navigation on the microscale. European Physical Journal - Special Topics 17.
Journal Article
120 (43), pp. 11113 - 11122 (2016)
Mechanism of facilitated diffusion during a DNA search in crowded environments. The Journal of Physical Chemistry B 18.
Journal Article
49 (31), 315001 (2016)
Asymmetric exclusion process with a dynamic roadblock and open boundaries. Journal of Physics A: Mathematical and Theoretical 19.
Journal Article
14, 14:88 (2016)
Segregation of prokaryotic magnetosomes organelles is driven by treadmilling of a dynamic actin-like MamK filament. BMC Biology 20.
Journal Article
49, 065003 (2016)
Steering magnetic micropropellers along independent trajectories. Journal of Physics D: Applied Physics 21.
Journal Article
181, pp. 71 - 83 (2015)
Biologically controlled synthesis and assembly of magnetite nanoparticles. Faraday Discussions 22.
Journal Article
91 (2), 022701 (2015)
External forces influence the elastic coupling effects during cargo transport by molecular motors. Physical Review E 23.
Journal Article
12 (6), 066003 (2015)
Impact of the cell division cycle on gene circuits. Physical Biology 24.
Journal Article
3, 45 (2015)
Biochemical reactions in crowded environments: revisiting the effects of volume exclusion with simulations. Frontiers in Physics 25.
Journal Article
17 (4), 043007 (2015)
Elastic properties of magnetosome chains. New Journal of Physics 26.
Journal Article
2015 (T165), 014044 (2015)
Navigation with magnetic nanoparticles: magnetotactic bacteria and magnetic micro-robots. Physica Scripta 27.
Journal Article
6 (2), e02286-14 (2015)
Positioning the flagellum at the center of a dividing cell to combine bacterial division with magnetic polarity. mBio 28.
Journal Article
12 (4), 046004 (2015)
Emergence of phenotype switching through continuous and discontinuous evolutionary transitions. Physical Biology 29.
Journal Article
48 (1), 015007 (2015)
Dynamic blockage in an exclusion process. Journal of Physics A: Mathematical and Theoretical 30.
Journal Article
15, pp. 7064 - 7070 (2015)
Fast magnetic micropropellers with random shapes. Nano Letters 31.
Journal Article
9 (7), e101150 (2014)
Influence of magnetic fields on magneto-aerotaxis. PLoS One 32.
Journal Article
348, pp. 1 - 11 (2014)
Modeling stochastic gene expression in growing cells. Journal of Theoretical Biology 33.
Journal Article
The secret life of a cellular business. LaboratoryNews (1), pp. 20 - 21 (2014)
34.
Journal Article
28, pp. 96 - 102 (2014)
Bacterial growth: global effects on gene expression, growth feedback and proteome partition. Current Opinion in Biotechnology 35.
Journal Article
14 (8), pp. 4653 - 4659 (2014)
Probing the mechanical properties of magnetosome chains in living magnetotactic bacteria. Nano Letters 36.
Journal Article
107 (2), pp. 527 - 538 (2014)
Diversity of magneto-aerotactic behaviors and oxygen sensing mechanisms in cultured magnetotactic bacteria. Biophysical Journal 37.
Journal Article
42 (4), pp. 2687 - 2696 (2014)
Differences between cotranscriptional and free riboswitch folding. Nucleic Acids Research 38.
Journal Article
5, p. 3759 - 3759 (2014)
Bacterial twitching motility is coordinated by a two-dimensional tug-of-war with directional memory. Nature Communications 39.
Journal Article
10 (10), e1003845 (2014)
A model for sigma factor competition in bacterial cells. PLoS Computational Biology 40.
Journal Article
89 (3), 030702 (2014)
Phenotypically heterogeneous populations in spatially heterogeneous environments. Physical Review E 41.
Journal Article
10 (8), 747 (2014)
Emergence of robust growth laws from optimal regulation of ribosome synthesis. Molecular Systems Biology 42.
Journal Article
42 (17), pp. 10987 - 10999 (2014)
Control of transcription elongation by GreA determines rate of gene expression in Streptococcus pneumoniae. Nucleic Acids Research 43.
Journal Article
6 (1 SI), pp. 48 - 64 (2013)
Elastic coupling effects in cooperative transport by a pair of molecular motors. Cellular and Molecular Bioengineering 44.
Journal Article
87 (2), 022146 (2013)
Mass transport perspective on an accelerated exclusion process: Analysis of augmented current and unit-velocity phases. Physical Review E 45.
Journal Article
88 (5), 052701 (2013)
Kinetic Monte Carlo approach to RNA folding dynamics using structure-based models. PHYSICAL REVIEW E 46.
Journal Article
7 (1), 22 (2013)
Dilution and the theoretical description of growth-rate dependent gene expression. Journal of Biological Engineering 47.
Journal Article
105 (12), pp. 2613 - 2614 (2013)
A Superresolution Census of RNA Polymerase. Biophysical Journal 48.
Journal Article
110 (42), pp. 16754 - 16759 (2013)
Molecular crowding limits translation and cell growth. Proceedings of the National Academy of Sciences of the United States of America 49.
Journal Article
8 (5), e62814 (2013)
Population dynamics of bacterial persistence. PLoS One 50.
Journal Article
25 (37), 374104 (2013)
Backtracking dynamics of RNA polymerase: pausing and error correction. Journal of Physics: Condensed Matter