Publikationen

Publikationen von Thomas R. Weikl

Zeitschriftenartikel (81)

1.
Zeitschriftenartikel
Kullmann, R.; Delbianco, M.; Roth, C.; Weikl, T. R.: Role of van der Waals, electrostatic, and hydrogen-bond interactions for the relative stability of cellulose Iβ and II crystals. bioRxiv: the preprint server for biology, 2024.03.04.583382 (2024)
2.
Zeitschriftenartikel
Asadollahi, K.; Rajput, S.; de Zhang, L. A.; Ang, C.-S.; Nie, S.; Williamson, N. A.; Griffin, M. D. W.; Bathgate, R. A. D.; Scott, D. J.; Weikl, T. R. et al.; Jameson, G. N. L.; Gooley, P. R.: Unravelling the mechanism of neurotensin recognition by neurotensin receptor 1. Nature Communications 14, 8155 (2023)
3.
Zeitschriftenartikel
Kav, B.; Weikl, T. R.; Schneck, E.: Measuring pico-Newton forces with lipid anchors as force sensors in molecular dynamics simulations. The Journal of Physical Chemistry B 127 (18), S. 4081 - 4089 (2023)
4.
Zeitschriftenartikel
Pettmann, J.; Awada, L.; Różycki, B.; Huhn, A.; Faour, S.; Kutuzov, M.; Limozin, L.; Weikl, T. R.; van der Merwe, P. A.; Robert, P. et al.; Dushek, O.: Mechanical forces impair antigen discrimination by reducing differences in T-cell receptor/peptide–MHC off-rates. The EMBO Journal 42 (7), e111841 (2023)
5.
Zeitschriftenartikel
Chakrabarti, K. S.; Olsson, S.; Pratihar, S.; Giller, K.; Overkamp, K.; Lee, K. O.; Gapsys, V.; Ryu, K.-S.; de Groot, B. L.; Noé, F. et al.; Becker, S.; Lee, D.; Weikl, T. R.; Griesinger, C.: A litmus test for classifying recognition mechanisms of transiently binding proteins. Nature Communications 13, 3792 (2022)
6.
Zeitschriftenartikel
Weikl, T. R.: A protein curvature for sensing touch. Proceedings of the National Academy of Sciences of the United States of America 119 (42), e2214536119 (2022)
7.
Zeitschriftenartikel
Bonazzi, F.; Hall, C.; Weikl, T. R.: Membrane morphologies induced by mixtures of arc-shaped particles with opposite curvature. Soft Matter 17 (2), S. 268 - 275 (2021)
8.
Zeitschriftenartikel
Kav, B.; Demé, B.; Gege, C.; Tanaka, M.; Schneck, E.; Weikl, T. R.: Interplay of trans- and cis-interactions of glycolipids in membrane adhesion. Frontiers in Molecular Biosciences 8 (1047), 754654 (2021)
9.
Zeitschriftenartikel
Pandey, P. R.; Różycki, B.; Lipowsky, R.; Weikl, T. R.: Structural variability and concerted motions of the T cell receptor - CD3 complex. eLife 10, e67195 (2021)
10.
Zeitschriftenartikel
Różycki, B.; Weikl, T. R.: Cooperative stabilization of close-contact zones leads to sensitivity and selectivity in T-cell recognition. Cells 10 (5), 1023 (2021)
11.
Zeitschriftenartikel
Kav, B.; Grafmüller, A.; Schneck, E.; Weikl, T. R.: Weak carbohydrate-carbohydrate interactions in membrane adhesion are fuzzy and generic. Nanoscale 12 (33), S. 17342 - 17353 (2020)
12.
Zeitschriftenartikel
Weikl, T. R.; Hemmateenejad, B.: Accessory mutations balance the marginal stability of the HIV-1 protease in drug resistance. Proteins: Structure, Function, and Bioinformatics 88 (3), S. 476 - 484 (2020)
13.
Zeitschriftenartikel
Bonazzi, F.; Weikl, T. R.: Membrane morphologies induced by arc-shaped scaffolds are determined by arc angle and coverage. Biophysical Journal 116 (7), S. 1239 - 1247 (2019)
14.
Zeitschriftenartikel
Mobaraki, N.; Hemmateenejad, B.; Weikl, T. R.; Sakhteman, A.: On the relationship between docking scores and protein conformational changes in HIV-1 protease. Journal of molecular graphics and modelling 91, S. 186 - 193 (2019)
15.
Zeitschriftenartikel
Steinkühler, J.; Różycki, B.; Alvey, C.; Lipowsky, R.; Weikl, T. R.; Dimova, R.; Discher, D. E.: Membrane fluctuations and acidosis regulate cooperative binding of “marker of self” CD47 with macrophage checkpoint receptor SIRPα. Journal of Cell Science 132 (4), JCS216770 (2019)
16.
Zeitschriftenartikel
Weikl, T. R.; Hu, J.; Kav, B.; Różycki, B.: Binding and segregation of proteins in membrane adhesion: theory, modeling, and simulations. Advances in Biomembranes and Lipid Self-Assembly 30, S. 159 - 194 (2019)
17.
Zeitschriftenartikel
Bahrami, A. H.; Weikl, T. R.: Curvature-mediated assembly of Janus nanoparticles on membrane vesicles. Nano Letters 18 (2), S. 1259 - 1263 (2018)
18.
Zeitschriftenartikel
Bassereau, P.; Jin, R.; Baumgart, T.; Deserno, M.; Dimova, R.; Frolov, V. A.; Bashkirov, P. V.; Grubmüller, H.; Jahn, R.; Risselada, H. J. et al.; Johannes, L.; Kozlov, M. M.; Lipowsky, R.; Pucadyil, T. J.; Zeno, W. F.; Stachowiak, J. C.; Stamou, D.; Breuer, A.; Lauritsen, L.; Simon, C.; Sykes, C.; Voth, G. A.; Weikl, T. R.: The 2018 biomembrane curvature and remodeling roadmap. Journal of Physics D: Applied Physics 51 (34), 343001 (2018)
19.
Zeitschriftenartikel
Paul, F.; Noé, F.; Weikl, T. R.: Identifying conformational-selection and induced-fit aspects in the binding-induced folding of PMI from Markov state modeling of atomistic simulations. Journal of Physical Chemistry B 122 (21), S. 5649 - 5656 (2018)
20.
Zeitschriftenartikel
Sadeghi, M.; Weikl, T. R.; Noe, F.: Particle-based membrane model for mesoscopic simulation of cellular dynamics. The Journal of Chemical Physics 148 (4), 044901 (2018)
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