Publikationen

Zeitschriftenartikel (40)

2012

Zeitschriftenartikel

Bahrami, A. H.; Lipowsky, R.; Weikl, T. R.: Tubulation and aggregation of spherical nanoparticles adsorbed on vesicles. Physical Review Letters 109 (18), 188102 (2012)

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Brilliantov, N. V.; Seidel, C.: Grafted polyelectrolyte in strong electric field under load: field-regulated force and chain contraction. EPL 97 (2), 28006 (2012)

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Casse, O.; Shkilnyy, A.; Linders, J.; Mayer, C.; Haussinger, D.; Völkel, A.; Thünemann, A. F.; Dimova, R.; Cölfen, H.; Meier, W. et al.; Schlaad, H.; Taubert, A.: Solution behavior of double-hydrophilic block copolymers in dilute aqueous solution. Macromolecules 45 (11), S. 4772 - 4777 (2012)

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Deneke, C.; Rudorf, S.; Valleriani, A.: Transient Phenomena in Gene Expression after Induction of Transcription. PLoS One 7 (4), e35044 (2012)

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Dimova, R.: Giant vesicles: a biomimetic tool for membrane characterization. Advances in Planar Lipid Bilayers and Liposomes 16, S. 1 - 50 (2012)

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Dimova, R.; Lipowsky, R.: Lipid membranes in contact with aqueous phases of polymer solutions. Soft Matter 8 (24), S. 2409 - 2415 (2012)

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Dong, J. J.; Klumpp, S.; Zia, R. K. P.: Entrainment and unit velocity: surprises in an accelerated exclusion process. Physical Review Letters 109 (13), 130602 (2012)

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Fedyunin, I.; Lehnhardt, L.; Böhmer, N.; Kaufmann, P.; Zhang, G.; Ignatova, Z.: tRNA concentration fine tunes protein solubility. FEBS Letters 586 (19), S. 3336 - 3340 (2012)

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Garz, A.; Sandmann, M.; Rading, M.; Ramm, S.; Menzel, R.; Steup, M.: Cell-to-cell diversity in a synchronized Chlamydomonas culture as revealed by single-cell analyses. Biophysical Journal 103 (5), S. 1078 - 1086 (2012)

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Guskova, O. A.; Seidel, C.: Assembly of nano-particles on diblock copolymer brushes: toward laterally nano-structured composites. Soft Matter 8 (10), S. 2833 - 2843 (2012)

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Hausmann, R.; Grepl, M.; Knecht, V.; Moeller, M. J.: The glomerular filtration barrier function: new concepts. Current Opinion in Nephrology and Hypertension 21 (4), S. 441 - 449 (2012)

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Kar, P.; Knecht, V.: Energetics of mutation-induced changes in potency of lersivirine against HIV-1 reverse transcriptase. Journal of Physical Chemistry B 116 (22), S. 6269 - 6278 (2012)

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Kar, P.; Knecht, V.: Mutation-induced loop opening and energetics for binding of tamiflu to influenza N8 neuraminidase. Journal of Physical Chemistry B 116 (21), S. 6137 - 6149 (2012)

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Kar, P.; Knecht, V.: Origin of decrease in potency of darunavir and two related antiviral inhibitors against HIV-2 compared to HIV-1 protease. Journal of Physical Chemistry B 116 (8), S. 2605 - 2614 (2012)

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Kar, P.; Knecht, V.: Energetic basis for drug resistance of HIV-1 protease mutants against amprenavir. Journal of Computer-Aided Molecular Design 26 (2), S. 215 - 232 (2012)

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Keller, P.; Valleriani, A.: Single-molecule stochastic times in a reversible bimolecular reaction. The Journal of Chemical Physics 137 (8), 084106 (2012)

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Klumpp, S.: Mechanisms and economy of molecular machines. Physica Scripta T151, 014066 (2012)

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Klumpp, S.; Dong, J. J.; Hwa, T.: On ribosome load, codon usage and protein abundance. PLoS One 7, e48542 (2012)

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Klumpp, S.; Faivre, D.: Interplay of magnetic interactions and active movements in the formation of magnetosome chains. PLoS One 7 (3), e33562 (2012)

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Knorr, R. L.; Dimova, R.; Lipowsky, R.: Curvature of double-membrane organelles generated by changes in membrane size and composition. PLoS One 7 (3), e32753 (2012)

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Kusumaatmaja, H.; Lipowsky, R.; Jin, C.; Mutihac, R. C.; Riegler, H.: Nonisomorphic nucleation pathways arising from morphological transitions of liquid channels. Physical Review Letters 108 (12), 126102 (2012)

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Lechner, S.; Patra, P.; Klumpp, S.; Bertram, R.: Interplay between population dynamics and drug tolerance in Staphylococcus aureus persister cells. Journal of Molecular Microbiology and Biotechnology 22, S. 381 - 391 (2012)

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Li, X.; Lipowsky, R.; Kierfeld, J.: Critical motor number for fractional steps of cytoskeletal filaments in gliding assays. PLoS One 7 (8), e43219 (2012)

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Li, Y. H.; Kusumaatmaja, H.; Lipowsky, R.; Dimova, R.: Wetting-induced budding of vesicles in contact with several aqueous phases. The Journal of Physical Chemistry B 116 (6), S. 1819 - 1823 (2012)

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Liu, Y.; Lipowsky, R.; Dimova, R.: Concentration dependence of the interfacial tension for aqueous two-phase polymer solutions of dextran and polyethylene glycol. Langmuir 28 (8), S. 3831 - 3839 (2012)

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Marathe, R.; Bierbaum, V.; Gomez, D.; Klumpp, S.: Deterministic and stochastic descriptions of gene expression dynamics. Journal of Statistical Physics 148 (4), S. 607 - 626 (2012)

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Marathe, R.; Gomez, D.; Klumpp, S.: Sources of stochasticity in constitutive and autoregulated gene expression. Physica Scripta T151, 014068 (2012)

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Miettinen, M. S.; Knecht, V.; Monticelli, L.; Ignatova, Z.: Assessing polyglutamine conformation in the nucleating event by molecular dynamics simulations. The Journal of Physical Chemistry B 116 (34), S. 10259 - 10265 (2012)

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Niedermayer, T.; Jégou, A.; Chieze, L.; Guichard, B.; Helfer, E.; Romet-Lemonne, G.; Carlier, M. F.; Lipowsky, R.: Intermittent depolymerization of actin filaments is caused by photo-induced dimerization of actin protomers. Proceedings of the National Academy of Sciences of the United States of America 109 (27), S. 10769 - 10774 (2012)

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Rózycki, B.; Boura, E.; Hurley, J. H.; Hummer, G.: Membrane-elasticity model of coatless vesicle budding induced by ESCRT complexes. PLoS Computational Biology 8 (10), e1002736 (2012)

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Rudorf, S.; Rädler, J. O.: Self-assembly of stable monomolecular nucleic acid lipid particles with a size of 30 nm. Journal of the American Chemical Society 134 (28), S. 11652 - 11658 (2012)

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Rusconi, M.; Valleriani, A.; Dunlop, J. W. C.; Kurths, J.; Weinkamer, R.: Quantitative approach to the stochastics of bone remodeling. EPL 97 (2), 28009 (2012)

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Salipante, P. F.; Knorr, R. L.; Dimova, R.; Vlahovska, P. M.: Electrodeformation method for measuring the capacitance of bilayer membranes. Soft Matter 8 (14), S. 3810 - 3816 (2012)

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Stefaniu, C.; Vilotijevic, I.; Santer, M.; Varón Silva, D.; Brezesinski, G.; Seeberger, P. H.: Subgel phase structure in monolayers of glycosylphosphatidylinositol glycolipids. Angewandte Chemie International Edition 51, S. 12874 - 12878 (2012)

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Stieger, T.; Schoen, M.; Weikl, T. R.: Adhesion of surfaces mediated by adsorbed particles: Monte Carlo simulations and a general relationship between adsorption isotherms and effective adhesion energies. Soft Matter 8, S. 11737 - 11745 (2012)

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Verde, A. V.; Bolhuis, P. G.; Campen, R. K.: Statics and dynamics of free and hydrogen-bonded OH groups at the air/water interface. The Journal of Physical Chemistry B 116 (31), S. 9467 - 9481 (2012)

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von Deuster, C. I. E.; Knecht, V.: Antimicrobial selectivity based on zwitterionic lipids and underlying balance of interactions. Biochimica et Biophysica Acta: BBA 1818 (9), S. 2192 - 2201 (2012)

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Zeitschriftenartikel

Wehle, M.; Vilotijevic, I.; Lipowsky, R.; Seeberger, P. H.; Varón Silva, D.; Santer, M.: Mechanical compressibility of the glycosylphosphatidylinositol (GPI) anchor backbone governed by independent glycosidic linkages. Journal of the American Chemical Society 134 (46), S. 18964 - 18972 (2012)

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Weikl, T. R.; Boehr, D. D.: Conformational selection and induced changes along the catalytic cycle of Escherichia coli dihydrofolate reductase. Proteins: Structure, Function, and Bioinformatics 80 (10), S. 2369 - 2383 (2012)

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Zeitschriftenartikel

Zhang, G.; Fedyunin, I.; Kirchner, S.; Xiao, C. L.; Valleriani, A.; Ignatova, Z.: FANSe: an accurate algorithm for quantitative mapping of large scale sequencing reads. Nucleic Acids Research (London) 40 (11), e83 (2012)

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Buchkapitel (1)

2012

Buchkapitel

Faber, M.; Klumpp, S.: RNA folding dynamics studied with structure-based models. In: From Computational Biophysics to Systems Biology (CBSB11), S. 45 - 48 (Hg. Carloni, P.). Forschungszentrum Jülich, Jülich (2012)

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