Publikationen

Zeitschriftenartikel (36)

2021
Zeitschriftenartikel
Agudo-Canalejo, J.; Schultz, S. W.; Chino, H.; Migliano, S. M.; Saito, C.; Koyama-Honda, I.; Stenmark, H.; Brech, A.; May, A. I.; Mizushima, N. et al.; Knorr, R. L.: Wetting regulates autophagy of phase-separated compartments and the cytosol. Nature 591 (7848), S. 142 - 146 (2021)
Zeitschriftenartikel
Antila, H.; M. Ferreira, T.; Ollila, O. H. S.; Miettinen, M. S.: Using open data to rapidly benchmark biomolecular simulations: phospholipid conformational dynamics. Journal of Chemical Information and Modeling 61 (2), S. 938 - 949 (2021)
Zeitschriftenartikel
Avalos Padilla, Y.; Georgiev, V.; Dimova, R.: ESCRT-III induces phase separation in model membranes prior to budding and causes invagination of the liquid-ordered phase. Biochimica et Biophysica Acta: BBA 1863 (10), 183689 (2021)
Zeitschriftenartikel
Avalos Padilla, Y.; Georgiev, V.; Lantero, E.; Pujals, S.; Verhoef, R.; N. Borgheti-Cardoso, L.; Albertazzi, L.; Dimova, R.; Fernàndez-Busquets, X.: The ESCRT-III machinery participates in the production of extracellular vesicles and protein export during Plasmodium falciparum infection. PLoS Pathogens 17 (4), e1009455 (2021)
Zeitschriftenartikel
Bachmann, F.; Giltinan, J.; Codutti, A.; Klumpp, S.; Sitti, M.; Faivre, D.: Opportunities and utilization of branching and step-out behavior in magnetic microswimmers with a nonlinear response. Applied Physics Letters 118 (17), 174102 (2021)
Zeitschriftenartikel
Bacle, A.; Buslaev, P.; Garcia-Fandino, R.; Favela-Rosales, F.; Mendes Ferreira, T.; Fuchs, P. F. J.; Gushchin, I.; Javanainen, M.; Kiirikki, A. M.; Madsen, J. J. et al.; Melcr, J.; Milán Rodríguez, P.; Miettinen, M. S.; Ollila, O. H. S.; Papadopoulos, C. G.; Peón, A.; Piggot, T. J.; Piñeiro, Á.; Virtanen, S. I.: Inverse conformational selection in lipid–protein binding. Journal of the American Chemical Society 143 (34), S. 13701 - 13706 (2021)
Zeitschriftenartikel
Bonazzi, F.; Hall, C.; Weikl, T. R.: Membrane morphologies induced by mixtures of arc-shaped particles with opposite curvature. Soft Matter 17 (2), S. 268 - 275 (2021)
Zeitschriftenartikel
Christ, S.; Litschel, T.; Schwille, P.; Lipowsky, R.: Active shape oscillations of giant vesicles with cyclic closure and opening of membrane necks. Soft Matter 17 (2), S. 319 - 330 (2021)
Zeitschriftenartikel
Danglad-Flores, J. A.; Eickelmann, S.; Riegler, H.: Evaporation behavior of a thinning liquid film in a spin coating setup: comparison between calculation and experiment. Engineering Reports 3 (9), e12390 (2021)
Zeitschriftenartikel
Faizi, H. A.; Dimova, R.; Vlahovska, P. M.: Electromechanical characterization of biomimetic membranes using electrodeformation of vesicles. Electrophoresis 42 (20), S. 2027 - 2032 (2021)
Zeitschriftenartikel
García-Aguilar, I.; Fonda, P.; Sloutskin, E.; Giomi, L.: Faceting and flattening of emulsion droplets: a mechanical model. Physical Review Letters 126 (3), 038001 (2021)
Zeitschriftenartikel
Geraili Daronkola, H.; Vila Verde, A.: Proteins maintain hydration at high [KCl] concentration regardless of content in acidic amino acids. Biophysical Journal 120 (13), S. 2746 - 2762 (2021)
Zeitschriftenartikel
Ghosh, R.; Satarifard, V.; Grafmüller, A.; Lipowsky, R.: Budding and fission of nanovesicles induced by membrane adsorption of small solutes. ACS Nano 15 (4), S. 7237 - 7248 (2021)
Zeitschriftenartikel
Guo, X.; Steinkühler, J.; Marin, M.; Li, X.; Lu, W.; Dimova, R.; Melikyan, G. B.: Interferon-induced transmembrane protein 3 blocks fusion of diverse enveloped viruses by altering mechanical properties of cell membranes. ACS Nano 15 (5), S. 8155 - 8170 (2021)
Zeitschriftenartikel
Irmscher, T.; Roske, Y.; Gayk, I.; Dunsing, V.; Chiantia, S.; Heinemann, U.; Barbirz, S.: Pantoea stewartii WceF is a glycan biofilm modifying enzyme with a bacteriophage tailspike-like fold. Journal of Biological Chemistry 296, 100286 (2021)
Zeitschriftenartikel
Kav, B.; Demé, B.; Gege, C.; Tanaka, M.; Schneck, E.; Weikl, T. R.: Interplay of trans- and cis-interactions of glycolipids in membrane adhesion. Frontiers in Molecular Biosciences 8 (1047), 754654 (2021)
Zeitschriftenartikel
Leomil, F.; Zoccoler, M.; Dimova, R.; Riske, K. A.: PoET: automated approach for measuring pore edge tension in giant unilamellar vesicles. Bioinformatics advances 1 (1), vbab037 (2021)
Zeitschriftenartikel
Lipowsky, R.; Dimova, R.: Introduction to remodeling of biomembranes. Soft Matter 17 (2), S. 214 - 221 (2021)
Zeitschriftenartikel
Lira, R. d.; Leomil, F. S.C.; Melo, R. J.; Riske, K. A.; Dimova, R.: To close or to collapse: the role of charges on membrane stability upon pore formation. Advanced Science 8 (11), 2004068 (2021)
Zeitschriftenartikel
López García, P.; de Araujo, A. D.; Bergues Pupo, A. E.; Tunn, I.; Fairlie, D. P.; Blank, K. G.: Fortified coiled coils: enhancing mechanical stability with lactam or metal staples. Angewandte Chemie International Edition 60 (1), S. 232 - 236 (2021)
Zeitschriftenartikel
Mohammadinejad, S.; Faivre, D.; Klumpp, S.: Stokesian dynamics simulations of a magnetotactic bacterium. The European Physical Journal E 44 (3), 40 (2021)
Zeitschriftenartikel
Otrin, L.; Witkowska, A.; Marušič, N.; Zhao, Z.; Lira, R. d.; Kyrilis, F. L.; Hamdi, F.; Ivanov, I.; Lipowsky, R.; Kastritis, P. L. et al.; Dimova, R.; Sundmacher, K.; Jahn, R.; Vidaković-Koch, T.: En route to dynamic life processes by SNARE-mediated fusion of polymer and hybrid membranes. Nature Communications 12, 4972 (2021)
Zeitschriftenartikel
Pandey, P. R.; Różycki, B.; Lipowsky, R.; Weikl, T. R.: Structural variability and concerted motions of the T cell receptor - CD3 complex. eLife 10, e67195 (2021)
Zeitschriftenartikel
Partipilo, M.; Ewins, E. J.; Frallicciardi, J.; Robinson, T.; Poolman, B.; Slotboom, D. J.: Minimal pathway for the regeneration of redox cofactors. JACS Au 1 (12), S. 2280 - 2293 (2021)
Zeitschriftenartikel
Robalo, J. R.; Mendes de Oliveira, D.; Ben-Amotz, D.; Vila Verde, A.: Influence of methylene fluorination and chain length on the hydration shell structure and thermodynamics of linear diols. The Journal of Physical Chemistry B 125 (49), S. 13552 - 13564 (2021)
Zeitschriftenartikel
Różycki, B.; Weikl, T. R.: Cooperative stabilization of close-contact zones leads to sensitivity and selectivity in T-cell recognition. Cells 10 (5), 1023 (2021)
Zeitschriftenartikel
Schindler, D.; Moldenhawer, T.; Stange, M.; Lepro, V.; Beta, C.; Holschneider, M.; Huisinga, W.: Analysis of protrusion dynamics in amoeboid cell motility by means of regularized contour flows. PLoS Computational Biology 17 (8), e1009268 (2021)
Zeitschriftenartikel
Shetty, S.; Yandrapalli, N.; Pinkwart, K.; Krafft, D.; Vidaković-Koch, T.; Ivanov, I.; Robinson, T.: Directed signaling cascades in monodisperse artificial eukaryotic cells. ACS Nano 15 (10), S. 15656 - 15666 (2021)
Zeitschriftenartikel
Steinkühler, J.; Fonda, P.; Bhatia, T.; Zhao, Z.; Leomil, F.; Lipowsky, R.; Dimova, R.: Superelasticity of plasma- and synthetic membranes resulting from coupling of membrane asymmetry, curvature, and lipid sorting. Advanced Science 8 (21), 2102109 (2021)
Zeitschriftenartikel
Taïeb, H. M.; Garske, D.; Contzen, J.; Gossen, M.; Bertinetti, L.; Robinson, T.; Cipitria, A.: Osmotic pressure modulates single cell cycle dynamics inducing reversible growth arrest and reactivation of human metastatic cells. Scientific Reports 11, 13455 (2021)
Zeitschriftenartikel
Tyrikos-Ergas, T.; Bordoni, V.; Fittolani, G.; Chaube, M.; Grafmüller, A.; Seeberger, P. H.; Delbianco, M.: Systematic structural characterization of chitooligosaccharides enabled by Automated Glycan Assembly. Chemistry – A European Journal 27 (7), S. 2321 - 2325 (2021)
Zeitschriftenartikel
Vikulina, A.; Campbell, J.: Biopolymer-based multilayer capsules and beads made via templating: advantages, hurdles and perspectives. Nanomaterials 11 (10), 2502 (2021)
Zeitschriftenartikel
Vikulina, A.; Stetsyura, I. Y.; Onses, M. S.; Yilmaz, E.; Skirtach, A. G.; Volodkin, D.: Mesoporous one-component gold microshells as 3D SERS substrates. Biosensors 11 (10), 380 (2021)
Zeitschriftenartikel
Yandrapalli, N.; Petit, J.; Bäumchen, O.; Robinson, T.: Surfactant-free production of biomimetic giant unilamellar vesicles using PDMS-based microfluidics. Communications Chemistry 4, 100 (2021)
Zeitschriftenartikel
Yuan, J.; Antila, H.; Luijten, E.: Particle–particle particle–mesh algorithm for electrolytes between charged dielectric interfaces. The Journal of Chemical Physics 154 (9), 094115 (2021)
Zeitschriftenartikel
Zhang, W.; Bertinetti, L.; Blank, K. G.; Dimova, R.; Gao, C.; Schneck, E.; Fratzl, P.: Spatiotemporal measurement of osmotic pressures by FRET imaging. Angewandte Chemie, International Edition in English 60 (12), S. 6488 - 6495 (2021)

Hochschulschrift - Doktorarbeit (6)

2021
Hochschulschrift - Doktorarbeit
Banerjee, P.: Glycosylphosphatidylinositols (GPIs) and GPI-anchored proteins tethered to lipid bilayers. Dissertation, xv, 141 S., Universität, Potsdam (2021)
Hochschulschrift - Doktorarbeit
Geraili Daronkola, H.: The role of acidic amino acids in the hydration and stabilization of halophilic proteins. Dissertation, Universität, Potsdam (2021)
Hochschulschrift - Doktorarbeit
Lepro, V.: Experimental and theoretical study on amoeboid cell-cargo active motion. Dissertation, xx, 114 S., Universität, Potsdam (2021)
Hochschulschrift - Doktorarbeit
Lepro, V.: Experimental and theoretical study on amoeboid cell-cargo active motion. Dissertation, xx, 114 S., Universität, Potsdam (2021)
Hochschulschrift - Doktorarbeit
Moga, A.: Reconstitution of molybdenum cofactor biosynthesis in giant vesicles. Dissertation, Universität, Potsdam (2021)
Hochschulschrift - Doktorarbeit
Satarifard, V.: Polymorphism of biomembranes at the nanoscale. Dissertation, 169 S., Humboldt-Universität zu Berlin, Mathematisch-Naturwissenschaftliche Fakultät, Berlin (2021)

Forschungspapier (4)

2021
Forschungspapier
Codutti, A.; Charsooghi, M.; Cerdá Doñate, E.; Taïeb, H. M.; Robinson, T.; Faivre, D.; Klumpp, S.: Single-cell motion of magnetotactic bacteria in microfluidic confinement: interplay between surface interaction and magnetic torque. bioRxiv, 2021.03.27.437322 (2021)
Forschungspapier
Faizi, H. A.; Dimova, R.; Vlahovska, P. M.: Viscosity of fluid membranes measured from vesicle deformation. arXiv - Condensed Matter: Materials Science, 2103.02106v1 (2021)
Forschungspapier
Fonda, P.; Giomi, L.: Metastability of lipid necks via geometric triality. arΧiv, 2021.01161 (2021)
Forschungspapier
Lepro, V.; Großmann, R.; Nagel, O.; Sharifi Panah, S.; Klumpp, S.; Lipowsky, R.; Beta, C.: Biohybrid active matter -- the emergent properties of cell-mediated microtransport. arXiv.org, 2112.11295v1 (2021)

Sonstige (1)

2021
Sonstige
Nagle, J. F.; Evans, E. A.; Bassereau, P.; Baumgart, T.; Tristram-Nagle, S.; Dimova, R.: A needless but interesting controversy, Proceedings of the National Academy of Sciences of the United States of America 118, (2021)
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