Publikationen

Zeitschriftenartikel (34)

2017
Zeitschriftenartikel
Agudo-Canalejo, J.; Golestanian, R.: Pattern formation by curvature-inducing proteins on spherical membranes. New Journal of Physics 19, 125013 (2017)
Zeitschriftenartikel
Agudo-Canalejo, J.; Lipowsky, R.: Uniform and Janus-like nanoparticles in contact with vesicles: energy landscapes and curvature-induced forces. Soft Matter 13 (11), S. 2155 - 2173 (2017)
Zeitschriftenartikel
Bhatia, T.; Cornelius, F.; Ipsen, J. H.: Capturing suboptical dynamic structures in lipid bilayer patches formed from free-standing giant unilamellar vesicles. Nature Protocols 12 (8), S. 1563 - 1575 (2017)
Zeitschriftenartikel
Brilliantov, N. V.; Budkov, Y. A.; Seidel, C.: Theoretical and numerical analysis of nano-actuators based on grafted polyelectrolytes in electric field. Faraday Discussion 199, S. 487 - 510 (2017)
Zeitschriftenartikel
Broeker, N. K.; Andres, D.; Kang, Y.; Gohlke, U.; Schmidt, A.; Kunstmann, S.; Santer, M.; Barbirz, S.: Complex carbohydrate recognition by proteins: fundamental insights from bacteriophage cell adhesion systems. Perspectives in Science 11, S. 45 - 52 (2017)
Zeitschriftenartikel
Bühning , M.; Valleriani, A.; Leimkühler, S.: The role of SufS is restricted to Fe−S cluster biosynthesis in Escherichia coli. Biochemistry 56 (14), S. 1987 - 2000 (2017)
Zeitschriftenartikel
Chen, G.; Pérez-García, R.; Danglad-Flores, J.; Riegler, H.: Capillary-enhanced immobilization of nanoparticles. The Journal of Physical Chemistry Letters 8 (24), S. 6094 - 6098 (2017)
Zeitschriftenartikel
Dimova, R.; Lipowsky, R.: Giant vesicles exposed to aqueous two-phase systems: membrane wetting, budding processes, and spontaneous tubulation. Advanced Materials Interfaces 4 (1), 1600451 (2017)
Zeitschriftenartikel
Ghaisari, S.; Winklhofer, M.; Strauch, P.; Klumpp, S.; Faivre, D.: Magnetosome organization in magnetotactic bacteria unraveled by ferromagnetic resonance spectroscopy. Biophysical Journal 113 (3), S. 637 - 644 (2017)
Zeitschriftenartikel
Gong, C. C.; Klumpp, S.: Modeling sRNA-regulated plasmid maintenance. PLoS One 12 (1), e0169703 (2017)
Zeitschriftenartikel
Heidari, M.; Satarifard, V.; Tans, S. J.; Ejtehadi, M. R.; Mashaghi, S.; Mashaghi, A.: Topology of internally constrained polymer chains. Physical Chemistry Chemical Physics 19 (28), S. 18389 - 18393 (2017)
Zeitschriftenartikel
Jehannin, M.; Charton, S.; Corso, B.; Möhwald, H.; Riegler, H.; Zemb, T.: Structured solvent effects on precipitation. Colloid and Polymer Science 295 (10), S. 1817 - 1826 (2017)
Zeitschriftenartikel
Karpitschka, S.; Liebig, F.; Riegler, H.: Marangoni contraction of evaporating sessile droplets of binary mixtures. Langmuir 33 (19), S. 4682 - 4687 (2017)
Zeitschriftenartikel
Kashefolgheta, S.; Vila Verde, A.: Developing force fields when experimental data is sparse: AMBER/GAFF-compatible parameters for inorganic and alkyl oxoanions. Physical Chemistry Chemical Physics 19 (31), S. 20593 - 20607 (2017)
Zeitschriftenartikel
Knorr, R. L.; Mizushima, N.; Dimova, R.: Fusion and scission of membranes: ubiquitous topological transformations in cells. Traffic 18 (11), S. 758 - 761 (2017)
Zeitschriftenartikel
Kubsch, B.; Robinson, T.; Steinkühler, J.; Dimova, R.: Phase behavior of charged vesicles under symmetric and asymmetric solution conditions monitored with fluorescence microscopy. Journal of Visualized Experiments 128, e56034 (2017)
Zeitschriftenartikel
Meurer, A.; Smith, C. P.; Paprocki, M.; Čertík, O.; Kirpichev, S. B.; Rocklin, M.; Kumar, A.; Ivanov, S.; Moore, J. K.; Singh, S. et al.; Rathnayake, T.; Vig, S.; Granger, B. E.; Muller, R. P.; Bonazzi, F.; Gupta, H.; Vats, S.; Johansson, F.; Pedregosa, F.; Curry, M. J.; Terrel, A. R.; Roučka, Š.; Saboo, A.; Fernando, I.; Kulal, S.; Cimrman, R.; Scopatz, A.: SymPy: symbolic computing in Python. PeerJ Computer Science 3, e103 (2017)
Zeitschriftenartikel
Paul, F.; Wehmeyer, C.; Abualrous, E. T.; Wu, H.; Crabtree, M. D.; Schöneberg, J.; Clarke, J.; Freund, C.; Weikl, T. R.; Noé, F.: Protein-peptide association kinetics beyond the seconds timescale from atomistic simulations. Nature Communications 8, 1095 (2017)
Zeitschriftenartikel
Pérez-García, R.; Riegler, H.: Controlled self-organized positioning of small aggregates by patterns of (sub)nanosized active sites. Crystal Growth & Design 17 (4), S. 1870 - 1875 (2017)
Zeitschriftenartikel
Raatz, M.; Weikl, T. R.: Membrane tubulation by elongated and patchy nanoparticles. Advanced Materials Interfaces 4 (1), 1600325 (2017)
Zeitschriftenartikel
Reddy-Alla, S.; Böhme, M. A.; Reynolds, E.; Beis, C.; Grasskamp, A. T.; Mampell, M. M.; Maglione, M.; Jusyte, M.; Rey, U.; Babikir, H. et al.; McCarthy, A. W.; Quentin, C.; Matkovic, T.; Bergeron, D. D.; Mushtaq, Z.; Göttfert, F.; Owald, D.; Mielke, T.; Hell, S. W.; Sigrist, S. J.; Walter, A. M.: Stable positioning of Unc13 restricts synaptic vesicle fusion to defined release sites to promote synchronous neurotransmission. Neuron 95 (6), S. 1350 - 1364.e12 (2017)
Zeitschriftenartikel
Robalo, J. R.; Huhmann, S.; Koksch, B.; Verde, A. V.: The multiple origins of the hydrophobicity of fluorinated apolar amino acids. Chem 3 (5), S. 881 - 897 (2017)
Zeitschriftenartikel
Satarifard, V.; Heidari, M.; Mashaghi, S.; Tans, S. J.; Ejtehadi, M. R.; Mashaghi, A.: Topology of polymer chains under nanoscale confinement. Nanoscale 9 (33), S. 12170 - 12177 (2017)
Zeitschriftenartikel
Satarifard, V.; Kashefolgheta, S.; Verde, A. V.; Grafmüller, A.: Is the solution activity derivative sufficient to parametrize ion–ion interactions? Ions for tip5p water. Journal of Chemical Theory and Computation 13 (5), S. 2112 - 2122 (2017)
Zeitschriftenartikel
Sauter, J.; Grafmüller, A.: A procedure for transferable coarse-grained models of aqueous polysaccarides. Journal of Chemical Theory and Computation 13 (1), S. 223 - 236 (2017)
Zeitschriftenartikel
Singh, G.; Verma, R.; Wagle, S.; Gadre, S. R.: Explicit hydration of ammonium ion by correlated methods employing molecular tailoring approach. Molecular Physics 115 (21-22), S. 2708 - 2720 (2017)
Zeitschriftenartikel
Soulié, V.; Lequien, F.; Ferreira-Gomes, F.; Moine, G.; Feron, D.; Prene, P.; Möhwald, H.; Zemb, T.; Riegler, H.: Salt-induced iron corrosion under evaporating sessile droplets of aqueous sodium chloride solutions. Materials and Corrosion - Werkstoffe und Korrosion 68 (9), S. 927 - 934 (2017)
Zeitschriftenartikel
Stange, M.; Hintsche, M.; Sachse, K.; Gerhardt, M.; Valleriani, A.; Beta, C.: Analyzing the spatial positioning of nuclei in polynuclear giant cells. Journal of Physics D: Applied Physics 50 (46), 464001 (2017)
Zeitschriftenartikel
Sun, B.; Li, Q.; Riegler, H.; Eickelmann, S.; Dai, L.; Yang, Y.; Pérez-García, R.; Jia, Y.; Chen, G.; Fei, J. et al.; Holmberg, K.; Li, J.: Self-assembly of ultralong aligned dipeptide single crystals. ACS Nano 11 (10), S. 10489 - 10494 (2017)
Zeitschriftenartikel
Sun, J.; Xu, J.; Grafmüller, A.; Huang, X.; Liedel, C.; Algara-Siller, G.; Willinger, M.; Yang, C.; Fu, Y.; Wang, X. et al.; Shalom, M.: Self-assembled carbon nitride for photocatalytic hydrogen evolution and degradation of p-nitrophenol. Applied Catalysis B: Environmental 205, S. 1 - 10 (2017)
Zeitschriftenartikel
Tsereteli, L.; Grafmüller, A.: An accurate coarse-grained model for chitosan polysaccharides in aqueous solution. PLoS One 12 (7), e0180938 (2017)
Zeitschriftenartikel
Uçar, M. C.; Lipowsky, R.: Tug-of-war between two elastically coupled molecular motors: a case study on force generation and force balance. Soft Matter 13 (2), S. 328 - 344 (2017)
Zeitschriftenartikel
Wiechecki, K.; Manohar, S.; Silva, G.; Tchourine, K.; Jacob, S.; Valleriani, A.; Vogel, C.: Integrative meta-analysis reveals that most yeast proteins are very stable. bioRxiv (2017)
Zeitschriftenartikel
Wijekoon, C. J. K.; Udagedara, S. R.; Knorr, R. L.; Dimova, R.; Wedd, A. G.; Xiao, Z.: Copper ATPase CopA from Escherichia coli: quantitative correlation between ATPase activity and vectorial copper transport. Journal of the American Chemical Society 139 (12), S. 4266 - 4269 (2017)

Meeting Abstract (11)

2017
Meeting Abstract
Casadei, B. R.; Caritá, A. C.; Dutra, V. F.; de Paula, E.; Dimova, R.; Figueiredo, M. S.; Riske, K. A.: Mechanical Properties of Model Erythrocytes Membranes from Healthy and Hereditary Spherocytosis Subjects. In Biophysical Journal, 112 (3) Supplement 1 Aufl., S. 383a. Cell Press, Cambridge, Mass. (2017)
Meeting Abstract
Dimova, R.; Bhatia, T.; Dasgupta, R.; Fricke, N.; Agudo-Canalejo, J.; Lipowsky, R.: GM1 Softens the Membrane, Induces Domains and Causes Spontaneous Tubulation in Giant Vesicles. In Biophysical Journal, 112 (3), S. 42a. Cell Press, Cambridge, Mass. (2017)
Meeting Abstract
Kashef Ol Gheta, S.; Vila Verde, A.: Excess sodium dramatically alters binding preference between oxoanions and cationic amino acids. In European Biophysics Journal with Biophysics Letters, 46 (Suppl. 1), P-402, S. S219 - S219. 19th IUPAB Congress / 11th EBSA Congress Location: British Biophys Soc, Edinburgh, Scotland, 16. Juli 2017 - 20. Juli 2017. Springer, Berlin (2017)
Meeting Abstract
Klumpp, S.; Lefevre, C.; Landau, L.; Codutti, A.; Bennet, M.; Faivre, D.: Magneto-Aerotaxis: Bacterial Motility in Magnetic Fields. In Biophysical Journal, 112 (3) Supplement 1 Aufl., S. 567a. Cell Press, Cambridge, Mass. (2017)
Meeting Abstract
Kubsch, B.; Robinson, T.; Kliesch, T.-T.; Janshoff, A.; Lipowsky, R.; Dimova, R.: Phase Specific Membrane Fusion with SNARE Mimetics. In Biophysical Journal, 112 (3) 3 Aufl., S. 77a. Cell Press, Cambridge, Mass. (2017)
Meeting Abstract
Lira, R. B.; Dimova, R.; Riske, K. A.: Stability of Charged Membranes: The Role of Pore Edge Tension. In Biophysical Journal, 112 (3) Supplement 1 Aufl., S. 174a. Cell Press, Cambridge, Mass. (2017)
Meeting Abstract
Lira, R. d.; Robinson, T.; Dimova, R.; Riske, K. A.: Charge-dependent membrane fusion in a pure lipid system. In European Biophysics Journal with Biophysics Letters, 46 (Suppl. 1), P-32, S. S123 - S123. 19th IUPAB Congress / 11th EBSA Congress Location: British Biophys Soc, Edinburgh, Scotland, 16. Juli 2017 - 20. Juli 2017. Springer, Berlin (2017)
Meeting Abstract
Luo, C.; Blank, K. G.; Lipowsky, R.; Vila Verde, A.: Mechanism of coiled-coil deformation under tension strongly depends on the pull speed. In European Biophysics Journal with Biophysics Letters, 46 (Suppl. 1), P-416, S. S222 - S222. 19th IUPAB Congress / 11th EBSA Congress Location: British Biophys Soc, Edinburgh, Scotland, 16. Juli 2017 - 20. Juli 2017. Springer, Berlin (2017)
Meeting Abstract
Rao, L.; Berger, F.; Nicholas, M. P.; Gennerich, A.: Dynein's Direction-Dependent Microtubule-Binding Strength is Controlled via a Tension-Induced Sliding of Dynein's Stalk Helices Mediated by the Coiled-Coil Strut. In Biophysical Journal, 112 (3) Supplement 1 Aufl., S. 5a. Cell Press, Cambridge, Mass. (2017)
Meeting Abstract
Robalo, J. R.; Huhmann, S.; Koksch, B.; Vila Verde, A.: The multiple origins of the hydrophobicity of fluorinated apolar amino acids. In European Biophysics Journal with Biophysics Letters, 46 (Suppl. 1), P-628, S. S278 - S278. 19th IUPAB Congress / 11th EBSA Congress Location: British Biophys Soc, Edinburgh, Scotland, 16. Juli 2017 - 20. Juli 2017. Springer, Berlin (2017)
Meeting Abstract
Steinkühler, J.; Bhatia, T.; Lipowsky, R.; Dimova, R.: Mechanical Properties of Giant Plasma Membrane Vesicles. In Biophysical Journal, 112 (3) Supplement 1 Aufl., S. 222a. Cell Press, Cambridge, Mass. (2017)

Hochschulschrift - Doktorarbeit (8)

2017
Hochschulschrift - Doktorarbeit
Georgiev, V.: Light-induced transformations in biomembranes. Dissertation, 81 S., Universität Potsdam, Potsdam (2017)
Hochschulschrift - Doktorarbeit
Kashef Ol Gheta, S.: Developing ion parameters and investigating ion specific effects in biological systems. Dissertation, 93 S., Freie Universität Berlin, Berlin (2017)
Hochschulschrift - Doktorarbeit
Kiani, B.: On structural properties of magnetosome chains. Dissertation, 117 S., Universität Potsdam, Potsdam (2017)
Hochschulschrift - Doktorarbeit
Kunstmann, S.: Design of a high-affinity carbohydrate binding protein. Dissertation, XI, 169 S., Universität Potsdam, Potsdam (2017)
Hochschulschrift - Doktorarbeit
Muždalo, A.: Thermal cis→trans isomerization of azobenzenes studied by path sampling and QM/MM stochastic dynamics. Dissertation, 144 S., Universität Potsdam, Potsdam (2017)
Hochschulschrift - Doktorarbeit
Paul, F.: Markov state modeling of binding and conformational changes of proteins. Dissertation, 112 S., Universität Potsdam, Potsdam (2017)
Hochschulschrift - Doktorarbeit
Sauter, J.: The molecular origin of plant cell wall swelling. Dissertation, 127 S., Universität Potsdam, Potsdam (2017)
Hochschulschrift - Doktorarbeit
Uçar, M. C.: Elastic interactions between antagonistic molecular motors. Dissertation, 106 S., Universität Potsdam, Potsdam (2017)
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